Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs73110944 chr5:67017380 T/C 4.37E-8 118 44.38 39.45 12.93 KM Plot
THYM rs73167295 chr7:158782949 T/A 3.09E-6 116 41.77 40.67 27.77 KM Plot
THYM rs73167296 chr7:158783129 C/T 2.47E-6 118 41.77 40.67 27.77 KM Plot
THYM rs73167299 chr7:158784367 C/T 2.28E-6 119 41.77 38.53 27.77 KM Plot
THYM rs73167302 chr7:158789762 G/A 1.64E-7 116 41.77 36.4 27.77 KM Plot
THYM rs73174526 chr2:10969640 G/A 0.000209 118 42.33 38.58 62.72 KM Plot
THYM rs73203017 chr12:114108977 A/G 0.00014 119 48 34.87 15.05 KM Plot
THYM rs73203021 chr12:114111010 G/A 0.00014 119 48 34.87 15.05 KM Plot
THYM rs73203023 chr12:114113460 G/A 0.00014 119 48 34.87 15.05 KM Plot
THYM rs73203046 chr12:114132397 C/T 9.14E-6 117 46.6 35 28.43 KM Plot
THYM rs73297441 chr7:29684363 T/C 5.34E-13 118 38.58 45.87 6 KM Plot
THYM rs73433598 chr11:16507562 A/C 8.69E-9 119 40.67 52.22 7.15 KM Plot
THYM rs73434177 chr11:20023995 G/A 2.69E-6 118 42.25 29.9 13.75 KM Plot
THYM rs73434181 chr11:20024254 G/C 2.69E-6 118 42.25 29.9 13.75 KM Plot
THYM rs73476684 chr13:26630705 G/T 3.01E-6 118 41.77 40.67 13.75 KM Plot